Sin descripción

2 Ramas

Ryan C. Thompson 5ffa57087d Add a figure for promoter logCPM filtering		hace 5 años
graphics	5ffa57087d Add a figure for promoter logCPM filtering	hace 5 años
.gitignore	9994879fae More polishing	hace 5 años
README.md	0fd5e43108 Remove latex math formatting from README	hace 5 años
ROC-TXvsAR-external-AUC.xlsx	40b0e7f13e Mostly finished all fRMA sections	hace 6 años
ROC-TXvsAR-internal-AUC.xlsx	40b0e7f13e Mostly finished all fRMA sections	hace 6 años
Snakefile	fb1f3bdfea Keep the intermediate presentation.tex around for vcs-check.py	hace 5 años
abbrevs.tex	abfa48ec0d Expand on T-cell memory and costimulation	hace 5 años
code-refs.bib	b31f1b0ed7 Fix some references, and improve processing of refs.bib	hace 5 años
extra-preamble.latex	c983b1fb5e Comment out some obsolete code in extra-preamble.latex	hace 5 años
presentation.mkdn	86b946bac0 Tweaks	hace 5 años
refs.bib	106cfcabe0 Update refs	hace 5 años
slides-notes.org	0f6ff09cfe Finish polishing	hace 5 años
thesis.lyx	5ffa57087d Add a figure for promoter logCPM filtering	hace 5 años
vcs-check.py	9900311a76 Make vcs-check.py compatible with Python 3.6	hace 5 años

Ryan Thompson's Thesis

Title: Bioinformatic analysis of complex, high-throughput genomic and epigenomic data in the context of CD4+ T-cell differentiation and diagnosis and treatment of transplant rejection

Final thesis document: https://mneme.dedyn.io/~ryan/Thesis/thesis-final.pdf
Defense slides: https://mneme.dedyn.io/~ryan/Thesis/presentation.pdf

The PDFs are generated from the LyX/LaTeX source and a bunch of supporting files using the Snakemake build tool.

README.md

Ryan Thompson's Thesis