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Ryan C. Thompson b4f1d1ad9d Append current CV to thesis		6 年之前
graphics	5ffa57087d Add a figure for promoter logCPM filtering	6 年之前
.gitignore	9994879fae More polishing	6 年之前
README.md	0fd5e43108 Remove latex math formatting from README	6 年之前
ROC-TXvsAR-external-AUC.xlsx	40b0e7f13e Mostly finished all fRMA sections	6 年之前
ROC-TXvsAR-internal-AUC.xlsx	40b0e7f13e Mostly finished all fRMA sections	6 年之前
Snakefile	b4f1d1ad9d Append current CV to thesis	6 年之前
abbrevs.tex	abfa48ec0d Expand on T-cell memory and costimulation	6 年之前
extra-preamble.latex	c983b1fb5e Comment out some obsolete code in extra-preamble.latex	6 年之前
library.bib	e850cb95f0 Update bib file	6 年之前
presentation.mkdn	86b946bac0 Tweaks	6 年之前
ryan_thompson_cv.pdf	b4f1d1ad9d Append current CV to thesis	6 年之前
slides-notes.org	0f6ff09cfe Finish polishing	6 年之前
thesis.lyx	b4f1d1ad9d Append current CV to thesis	6 年之前
update-library.sh	5c8a520770 Add script for pulling latext bib file from Zotero	6 年之前
vcs-check.py	9900311a76 Make vcs-check.py compatible with Python 3.6	6 年之前

Ryan Thompson's Thesis

Title: Bioinformatic analysis of complex, high-throughput genomic and epigenomic data in the context of CD4+ T-cell differentiation and diagnosis and treatment of transplant rejection

Final thesis document: https://mneme.dedyn.io/~ryan/Thesis/thesis-final.pdf
Defense slides: https://mneme.dedyn.io/~ryan/Thesis/presentation.pdf

The PDFs are generated from the LyX/LaTeX source and a bunch of supporting files using the Snakemake build tool.

README.md

Ryan Thompson's Thesis