 Ryan C. Thompson
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4fa1453db2
Add a script to check that all input files are tracked in git
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5 years ago |
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Ryan C. Thompson
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769f1f4b82
Revisions from Friday meeting with Andrew
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5 years ago |
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Ryan C. Thompson
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7d183c916e
Add Promoter neighborhood plots
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5 years ago |
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Ryan C. Thompson
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6751fd52c9
Ignore PDF files geneated from SVG
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5 years ago |
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Ryan C. Thompson
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a32439f4f6
Ignore LyX temp files
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5 years ago |
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Ryan C. Thompson
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aad24141ca
Use "convert" command instead of "magick" for Ubuntu
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5 years ago |
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Ryan C. Thompson
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f756c5b852
Add many more figures in chapter 2
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5 years ago |
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Ryan C. Thompson
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f86d6647b5
Add figures for batch effect confounding section
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5 years ago |
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Ryan C. Thompson
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52d9524b51
Add a bunch of figures to chapter 2
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5 years ago |
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Ryan C. Thompson
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dd1295b0ea
Add snakemake rule to autocrop png files
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5 years ago |
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Ryan C. Thompson
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6a2c8367c4
Ignore auto-generated cropped PDF files
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5 years ago |
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Ryan C. Thompson
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7749458525
Finish Chapter 3 discussion
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5 years ago |
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Ryan C. Thompson
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cf3ea1e458
Chapter 3 results nearly finished
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5 years ago |
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Ryan C. Thompson
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a4ff7cd587
More float placement tweaks
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6 years ago |
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Ryan C. Thompson
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ee09f83951
Fix some figure formatting
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6 years ago |
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Ryan C. Thompson
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84991f2707
Fix case sensitivity issues
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6 years ago |
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Ryan C. Thompson
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986832d16b
Add source PDF for sample-weights figure
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6 years ago |
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Ryan C. Thompson
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a38f1720c3
A little work on Ch3 results
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6 years ago |
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Ryan C. Thompson
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9256979ff8
More progress and lots of citations in Ch 2 Methods
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6 years ago |
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Ryan C. Thompson
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b53d294507
Progress on Ch3 methyl results and Ch2 methods
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6 years ago |
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Ryan C. Thompson
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a31375c0d3
Add some more entries to refs.bib
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6 years ago |
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Ryan C. Thompson
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d82bbe4d00
Fix gitignore rules for generated graphics
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6 years ago |
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Ryan C. Thompson
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f4c0a48ee2
Add meanvar-trends.pdf source files
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6 years ago |
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Ryan C. Thompson
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5e65476d04
Finish Chapter 3 Approach and Methods
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6 years ago |
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Ryan C. Thompson
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fe5214f5d3
Add some missing references to refs.bib
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6 years ago |
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Ryan C. Thompson
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e3f65a4452
Ignore generated graphics files
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6 years ago |
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Ryan C. Thompson
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d78fa3ccd7
Ignore data directory
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6 years ago |
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Ryan C. Thompson
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76f56107ff
Add Snakemake rules for preprocessing PDF files
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6 years ago |
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Ryan C. Thompson
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005114a790
Merge remote-tracking branch 'origin/master'
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6 years ago |
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Ryan C. Thompson
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fd8a1dc5f2
Add a TODO
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6 years ago |
