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Thesis
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Ryan C. Thompson 597cedad12 Resolve some TODO items 5 anos atrás
graphics 86b4af61cc Add a graphic for the experimental design 5 anos atrás
.gitignore 9994879fae More polishing 5 anos atrás
README.md 0fd5e43108 Remove latex math formatting from README 5 anos atrás
ROC-TXvsAR-external-AUC.xlsx 40b0e7f13e Mostly finished all fRMA sections 6 anos atrás
ROC-TXvsAR-internal-AUC.xlsx 40b0e7f13e Mostly finished all fRMA sections 6 anos atrás
Snakefile fb1f3bdfea Keep the intermediate presentation.tex around for vcs-check.py 5 anos atrás
abbrevs.tex abfa48ec0d Expand on T-cell memory and costimulation 5 anos atrás
code-refs.bib b31f1b0ed7 Fix some references, and improve processing of refs.bib 5 anos atrás
extra-preamble.latex c983b1fb5e Comment out some obsolete code in extra-preamble.latex 5 anos atrás
presentation.mkdn 86b946bac0 Tweaks 5 anos atrás
refs.bib 106cfcabe0 Update refs 5 anos atrás
slides-notes.org 0f6ff09cfe Finish polishing 5 anos atrás
thesis.lyx 597cedad12 Resolve some TODO items 5 anos atrás
vcs-check.py 9900311a76 Make vcs-check.py compatible with Python 3.6 5 anos atrás

README.md

Ryan Thompson's Thesis

Title: Bioinformatic analysis of complex, high-throughput genomic and epigenomic data in the context of CD4+ T-cell differentiation and diagnosis and treatment of transplant rejection

The PDFs are generated from the LyX/LaTeX source and a bunch of supporting files using the Snakemake build tool.