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@@ -14,10 +14,10 @@
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- https://pandoc.org/MANUAL.html#speaker-notes
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** TODO Presentation issues
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-- [ ] Bigger axis labels
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-- [ ] Better cluster ordering, labeling, and transpose violin plots
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+- [X] Bigger axis labels
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+- [X] Better cluster ordering, labeling, and transpose violin plots
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for consistency
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-- [ ] Whenever possible: micro first to introduce the plot, then macro
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+- [X] Whenever possible: micro first to introduce the plot, then macro
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to show the full plot
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- [ ] For PCoA plots, show just one donor at a time first to show
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the trend in a simpler context
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@@ -25,13 +25,12 @@
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** TODO Content issues
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- [ ] Maybe show more preprocessing, batch correction, etc.
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- [ ] Tie conclusions back to intro, add future directions
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-- [ ] Don't say "too complicated to explain"
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-- [ ] Intro slide for MOFA: how and why
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-- [ ] Too many bullet points. Don't need to write everything I say.
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+- [X] Intro slide for MOFA: how and why
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+- [X] Too many bullet points. Don't need to write everything I say.
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Move to speaker notes.
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-- [ ] Intro the histone marks and why we picked them
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-- [ ] Brief 30 second intro to RNA-seq & ChIP-seq
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-- [ ] Rephrase 3 topics as questions/hypotheses
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+- [X] Intro the histone marks and why we picked them
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+- [X] Brief 30 second intro to RNA-seq & ChIP-seq
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+- [X] Rephrase 3 topics as questions/hypotheses
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- [ ] Talk about 3 main take-home points at the beginning as well as
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the end
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- [ ] Keep reserve slides at the end with cut figures in case they
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@@ -40,7 +39,7 @@
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bullet
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- [ ] Time was around 40 minutes, so add at least 5 minutes of content
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-* Notes from Sabah
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+* DONE Notes from Sabah
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- [X] Slide 1: Is the title final? If not, would adjust to (also note
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space in title slide for bioinformaticsanalysis) "Bioinformatic
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@@ -64,16 +63,14 @@
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transition (well explained) but again the bullet points need to be
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condensed. Bring in an image with these as well to give the audience
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'a visual break' before you intro your topics
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-- [ ] I like the update to thesis topics. I would adjust such that 'my
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+- [X] I like the update to thesis topics. I would adjust such that 'my
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thesis topics' is replaced with the overarching question you want to
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answer for these 3 topics and make that the heading.
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-- [ ] Then, introduce the 3 topics in the next slide (blue font of
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+- [X] Then, introduce the 3 topics in the next slide (blue font of
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topic 1, 2... etc)
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-- [ ] Then, introduce the additional text for each topic in the next
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+- [X] Then, introduce the additional text for each topic in the next
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slide
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-- [ ] I like what you did with the font. It's more balanced now and
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- reads as one composed slide
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-- [ ] You have the 'memory cells' slides repeated 4x, and I see that
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+- [X] You have the 'memory cells' slides repeated 4x, and I see that
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you're highlighting different sections each time. Pair the heading
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to match with this (what you want to say in each as the take-home) >
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having the same heading repeated
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