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-[Insert thesis here]
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+# Ryan Thompson's Thesis
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+
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+**Title:** Bioinformatic analysis of complex, high-throughput genomic and epigenomic data in the context of $\textrm[CD4]^{+}$ T-cell differentiation and diagnosis and treatment of transplant rejection
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+
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+* Final thesis document: https://mneme.dedyn.io/~ryan/Thesis/thesis-final.pdf
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+* Defense slides: https://mneme.dedyn.io/~ryan/Thesis/presentation.pdf
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+
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+The PDFs are generated from the LyX/LaTeX source and a bunch of
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+supporting files using the
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+[Snakemake](https://snakemake.readthedocs.io/en/stable/) build tool.
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