Minor things

thesis.lyx

@@ -691,6 +691,22 @@ RNA-seq align+quant method comparison
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+No need for sideways
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@@ -703,12 +719,6 @@ Maybe fix up the excessive axis ranges for these plots?
 
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@@ -1488,6 +1498,19 @@ wide false
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+\begin_layout Plain Layout
+\begin_inset Flex TODO Note (inline)
+status open
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+\begin_layout Plain Layout
+No need for sideways
+\end_layout
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+\end_inset
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@@ -3648,7 +3671,7 @@ For the figures in this section, the group labels are arbitrary, so if time
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@@ -3856,7 +3879,7 @@ shape
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@@ -4095,32 +4118,8 @@ Show the figures where the negative result ended this line of inquiry
 Discussion
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-Try to boil it down to 3 main messages to get across
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-\begin_layout Itemize
-3 Main points
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-\begin_deeper
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-Naive-to-memory convergence in certain data sets but not others, implies
- which marks are involved in memory differentiation
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-
-\end_deeper
 \begin_layout Subsection
-Effective promoter radius 
+Effective promoter radius
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 \begin_layout Itemize
@@ -10747,6 +10746,18 @@ Consider per-chapter future directions.
 
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+\begin_layout Itemize
+Functional validation of effective promoter radius
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+
+\begin_layout Itemize
+N-to-M convergence deserves further stufy of some kind
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+\begin_layout Itemize
+Promoter positional coverage: follow up on hints of interesting patterns
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+
 \begin_layout Itemize
 Study other epigenetic marks in more contexts
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