Teaching: Teaching materials for my lecture and lab on introductory RNA-seq analysisCD4: Examples relating to my CD4 memory RNA-seq & ChIP-seq project450k: Examples relating to analysis of Illumina 450k DNA methylation arraysPathways: Examples of gene set and pathway analysis for RNA-seq dataglobin: Examples of my work in demonstrating the performance of a new globin blocking protocol for RNA-seq of blood tissuesfRMA: Examples and code from my work creating a custom frozen RMA reference to provide a stable normalization for machine learning applicationsDGE Presentation.pdf: A presentation comparing edgeR, DESeq, and limma on both a conceptual and practical levelAdvanced RNA-seq Analysis.pdf: A presentation on the advanced features of limma for RNA-seq analysisReproducible Workflow Presentation.pdf:Classifier Math Write-up.pdf: A short write-up to explain the mathematical principles behind the classifier method used in a machine learning projectblockbuster-pipeline.R.html: R code for clustering small RNA reads into clusters using Blockbustermdsplots-multidim.pdf: A PCA plot of RNA-seq data for C. elegans samples with and without a drug that retards the aging process, demonstrating smaller age-related changes with the drug (for this paper)