This folder contains some examples of my work in the Gaasterland Lab.

• delox.R.html: The R code for Deloxer
• depth-consistency.pdf: Visualization of consistency of coverage depth between 2 Exome sequencing replicates
• illumina-qc.html: QC chart indicating quality score dropoff along read length for exome sequencing data set.
• mirna-results.html: Example output from miRNA binding site predictions
• neartarget.pdf: Visualization of mean coverage depth in exome sequencing data in the regions flanking the probe targets.
• on-off-coverage.pdf: Relationship between covered on-target bases and covered off-target bases in exome-seq data, with varying extensions of the target region to allow for “near-target” capture.