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@@ -613,7 +613,7 @@ literal "false"
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\begin_layout Itemize
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Significantly improved cross-validated performance of machine learning classifie
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Significantly improved cross-validated performance of machine learning classifie
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r for identifying biomarkers of transplant rejection by developing appropriate
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r for identifying biomarkers of transplant rejection by developing appropriate
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- single-sample microarray normalization procedures
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+ single-sample microarray normalization procedures
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "Kurian2014"
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key "Kurian2014"
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@@ -676,8 +676,7 @@ literal "false"
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\begin_layout Itemize
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\begin_layout Itemize
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Evaluated and optimized cost and performance of custom protocol for RNA-seq
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Evaluated and optimized cost and performance of custom protocol for RNA-seq
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of human and primate blood samples while minimizing nuisance globin reads.
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of human and primate blood samples while minimizing nuisance globin reads.
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- Increased yield of useful reads nearly 2-fold.
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-
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+ Increased yield of useful reads nearly 2-fold
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "globin-reduction"
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key "globin-reduction"
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@@ -685,7 +684,7 @@ literal "true"
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\end_inset
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-
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+.
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@@ -713,8 +712,7 @@ transcriptional drift
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\begin_inset Quotes erd
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\begin_inset Quotes erd
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-, preserving a youthful phenotype at the molecular level.
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-
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+, preserving a youthful phenotype at the molecular level
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "Rangaraju2015a"
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key "Rangaraju2015a"
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@@ -722,7 +720,7 @@ literal "true"
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-
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+.
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@@ -852,8 +850,7 @@ literal "false"
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\begin_layout Itemize
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\begin_layout Itemize
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Adapted common normalization methods from RNA-seq to improve performance
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Adapted common normalization methods from RNA-seq to improve performance
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- in analysis of RASL-seq experiments.
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-
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+ in analysis of RASL-seq experiments
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "Scott2016"
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key "Scott2016"
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@@ -861,7 +858,7 @@ literal "true"
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-
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+.
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@@ -1011,7 +1008,7 @@ literal "false"
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\begin_layout Itemize
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\begin_layout Itemize
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Designed and implemented Deloxer, a critical software step in a new Illumina
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Designed and implemented Deloxer, a critical software step in a new Illumina
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mate-pair sequencing protocol using Cre recombination.
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mate-pair sequencing protocol using Cre recombination.
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- Deloxer is published
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+ Deloxer is publishedand now in use in several labs around the world
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "VanNieuwerburgh2012"
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key "VanNieuwerburgh2012"
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@@ -1019,7 +1016,7 @@ literal "true"
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\end_inset
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\end_inset
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- and now in use in several labs around the world.
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+.
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\begin_inset Newline newline
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@@ -1206,7 +1203,7 @@ literal "false"
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Undergraduate thesis: Designed and implemented Contig Farmer, an algorithm
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Undergraduate thesis: Designed and implemented Contig Farmer, an algorithm
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for efficient selective contig assembly starting from “seed” sequences
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for efficient selective contig assembly starting from “seed” sequences
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of interest, and used Contig Farmer to accelerate transcription factor
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of interest, and used Contig Farmer to accelerate transcription factor
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- gene discovery in cowpea and tobacco shotgun genomic sequence data
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+ gene discovery in cowpea and tobacco shotgun genomic sequence data
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\begin_inset CommandInset citation
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\begin_inset CommandInset citation
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LatexCommand cite
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LatexCommand cite
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key "Thompson2009"
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key "Thompson2009"
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